Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933278.1_cds_XP_016479662.1_71175
CDS Infomation

[gene=LOC107800908] [db_xref=GeneID:107800908] [protein=glutamate-rich WD repeat-containing protein 1-like isoform X2] [protein_id=XP_016479662.1] [location=complement(join(24470..24601,24690..24807,24942..25057,25669..25741,25827..25966,26089..26195,26309..26477,26792..26890,26984..27157,27695..27773,27874..28034,28123..28170))] [gbkey=CDS]
Sequence

ATGGTTCGAAGCTTAAAGAACCCTAAAAAAGCTAAACGGAAGAACAAGGGCGGAAAGAAA
GGAGAAGGATCGTCGAATGAAGTACCGTCGCTGCCAGCAAAGGTATGGCAACCAGGGGTA
GACAAATTGGAGGAAGGTGAAGAGCTTCAGTGTGACCCTTCTGCTTACAACTCTCTTCAT
GCCTTCCATATTGGCTGGCCATGCTTGAGTTTTGATGTGTTGCGTGACTCGCTGGGCTTG
GTGCGAACTGAGTTTCCACATACTGTATATTGTGTAGCAGGAACACAAGCAGAGAAAAGT
TCTTGGAACTCGATTGGAATTTTTAAGCTATCTAATATATCTGGAAAAAGGCGTGACTTG
GTGCCAAACAAGACAGGTGATGAGACTGATATGGACAGCGATAGTAGTGACAGTGATGAA
GAAGAAGAAGAGGAAGCTGGATCAGGGACACCTGTTCTACAGCTACGCAAGGTGTTTCAT
GAAGGATGTGTTAATCGCATCCGTGCTATGACGCAAAACCCTCATATAGTTGCTTCTTGG
GGTGATACTGGTCATGTTCAGGTTTGGGATTTTAGCTCTCATTTAAATGCTTTGGCAGAA
TCAGAGAGTGATCTTAGCCACGGGGCTTCTGCAGTCTCTAATCAATCACCCTTAGTTAAG
TTTGGCGGACATAAAGATGAAGGCTATGCTATAGATTGGAGTCCTCTTGTTCCGGGAAGG
CTCGTGTCAGGGGACTGCAAGAATTGTATCCATTTATGGGAGCCAACATCTGGTACAACA
TGGAATATTGATGCTAATCCTTTTGTTGGACACAGTGCAAGTGTTGAAGATCTCCAGTGG
AGCCCTACAGAACCTTCTGTATTCGCCTCTTGTTCAGTTGATGGAAGTATTGGCATATGG
GACATCCGTGTGGGTAAATCTCCTGCTACAACTATAAAGGCACATAAGGCAGATGTCAAT
GTTATATCATGGAACAGGTTGGCTAGCTGTATGCTTGCATCTGGAAGTGATGATGGGACA
TTTTCTATTCGAGATCTTAGATTGCTCAAGGAAGGAGATGCCGTCGTGGCACACTTTGAA
TATCACAAACATCCCATCACTTCTGTCGAATGGAGTCCCCATGAACCCTCAACTGTGGCT
GTTTCATCATCAGACAATCAGCTGACTATCTGGGACCTTTCTTTAGAGAGAGATGAGGAA
GAGGAGGCTGAATTCAAAGCTAAAATGAAGGAGGAAGTCAATGCCCCAACAGATTTGCCC
CCACAACTTCTCTTCGTTCATCAGGGTCAGAAAGATTTGAAAGAACTTCACTGGCATTCT
CAGATCCCAGGAATGGTTATATCCACTGCAGCAGATGGATTTAACATACTAATGCCATCA
AACATCGAAAACGCGCTTCCTGCAAATGATGCTTGA

Peptide Sequence

PEP ID

XP_016479662.1
PEP Infomation

PREDICTED: glutamate-rich WD repeat-containing protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MVRSLKNPKKAKRKNKGGKKGEGSSNEVPSLPAKVWQPGVDKLEEGEELQCDPSAYNSLH
AFHIGWPCLSFDVLRDSLGLVRTEFPHTVYCVAGTQAEKSSWNSIGIFKLSNISGKRRDL
VPNKTGDETDMDSDSSDSDEEEEEEAGSGTPVLQLRKVFHEGCVNRIRAMTQNPHIVASW
GDTGHVQVWDFSSHLNALAESESDLSHGASAVSNQSPLVKFGGHKDEGYAIDWSPLVPGR
LVSGDCKNCIHLWEPTSGTTWNIDANPFVGHSASVEDLQWSPTEPSVFASCSVDGSIGIW
DIRVGKSPATTIKAHKADVNVISWNRLASCMLASGSDDGTFSIRDLRLLKEGDAVVAHFE
YHKHPITSVEWSPHEPSTVAVSSSDNQLTIWDLSLERDEEEEAEFKAKMKEEVNAPTDLP
PQLLFVHQGQKDLKELHWHSQIPGMVISTAADGFNILMPSNIENALPANDA

Transcript Sequence

Gene sequence data has not been registered.